BARDA, Department of Defense, and SAb Biotherapeutics to Partner to Develop a Novel COVID-19 Therapeutic
Published by Medical Counter Measures
A therapeutic to treat novel coronavirus disease 2019 (COVID-19) is moving forward in development through a partnership between BARDA, the Department of Defense Joint Program Executive Office for Chemical, Biological, Radiological, and Nuclear Defense (JPEO – CBRND), and SAb Biotherapeutics, Inc. (SAb), of Sioux Falls, South Dakota.
Using an interagency agreement with JPEO’s Medical CBRN Defense Consortium, BARDA transferred approximately $7.2 million in funding to (JPEO – CBRND) to support SAb to complete manufacturing and preclinical studies, with an option to conduct a Phase 1 clinical trial.
Bovine plasma donors genetically engineered to produce human antibodies are in the front lines of the struggle against coronavirus.
SAB Biotherapeutics, a Sioux Falls, S.D., biotechnology company that has been successfully testing use of antibodies from cows to fight diseases such as another coronavirus, Middle East respiratory syndrome, now is engaged in developing a treatment for COVID-19, the disease caused by the novel coronavirus.
SYRACUSE, N.Y. (AP) — Chestnuts harvested from high branches on a chilly fall morning look typical: they’re marble sized, russet colored and nestled in prickly burs. But many are like no other nuts in nature.
In a feat of genetic engineering, about half the chestnuts collected at this college experiment station feature a gene that provides resistance to blight that virtually wiped out the American chestnut tree generations ago.
Curious about what gene editing is? Watch this video to learn how CRISPR is helping farmers grow better crops to feed our growing population.
April 22, 2019
What U.S. dairy farmers of today are doing to preserve our environment
I’ve had the honor of working with dairy farmers for years, and a lot of what you think about them is true. They’re modest. They’re connected to the earth. And they work incredibly hard. Every day, they’re up before dawn, working 12 and 14-hour days, whether it’s 90 degrees out or 50 degrees below zero.
They choose this hard work because they believe in the importance of providing nutritious, great-tasting food, like the milk in your child’s glass or the slice of cheese on her favorite sandwich.
What you might not know is that dairy farmers are working just as hard to ensure our children inherit a healthy planet. They know it’s the right thing to do. And when 95% of dairy farms are family-owned, they do it to ensure the land is there for their children.
But the issues facing our planet require more than just individual action, which is why the U.S. dairy community has made sustainability an industry-wide priority. Years’ worth of investments, research — and, yes, hard work — have allowed us to address critical environmental issues, like climate change and greenhouse gas emissions.
Dairy farmer and nutritionist Rosemarie Burgos-Zimbelman, who has dedicated her life to dairy nutrition. (Photo: Innovation Center for U.S. Dairy)
This Earth Day, and every day, America’s dairy farmers are living up to that responsibility. May they never tire.
Vilsack is the former U.S. Secretary of Agriculture and the current president and CEO of the U.S. Dairy Export Council.
Renegade bakers and geneticists develop whole-wheat loaves you’ll want to eat
BY VERONIQUE GREENWOOD BOSTON GLOBE
riving up through the rolling farmland north of Seattle this July, I was thinking about my next meal. I arrived in the small industrial park, home to the Washington State University Bread Lab, for a gathering of wheat geneticists and other grain professionals. I’d missed the explanation of the items on the buffet tables, made by attendees. I loaded my plate with about a pound of cookies from the dessert end and steadily consumed the lot. They were soft and nutty, with a rich ruddy color and a delicate crumb. I wiped buttery crumbs from my fingers. I went back for more.
“What are these?” I asked the volunteer by the coffee pots, brandishing a blondie bar. “I’m not sure,” she said. They must be made from some delicious heirloom grain, or something, I thought, surreptitiously loading my pockets.
They’re whole wheat, the lab’s head, Stephen Scott Jones, later told me. One hundred percent. That was a surprise; whole wheat baked goods are often eaten more out of obligation than pleasure. They are not known for their can’t-stop-eating flavor. And yet, the Bread Lab is making its name by doing something that is almost unique in the industry: Breeding wheat — especially wheat for whole wheat flour — for taste. They and their collaborators across the country have quietly launched an effort that they hope will create something new — a whole wheat loaf that people would actually like to eat.
Wheat breeders who develop new strains for the global market aim for traits like the right height for mechanized harvesting, the right texture for mechanized baking, and a high yield. As odd as it sounds, flavor more or less faded from breeders’ awareness somewhere along the line. Jones says that for most of his decades-long career as a breeder, it was not discussed. At the same time, knowledge of the importance of whole grains has been on the rise: Eating whole wheat and other unrefined grains correlates with better heart health, healthier weight, and even longer life, according to epidemiological studies.
So maybe the time is right. At the Bread Lab’s headquarters this summer, a plucky group of about 40 bakers, millers, breeders, and others met to test-bake a loaf they’ve been discussing and fine-tuning for the last two years. They call it the Approachable Loaf.
The loaf they’re all dreaming of has a simple recipe. Start, first of all, with the right wheat for the job. The lab grows thousands of newly generated strains of wheat every year to test them. Steve Lyon, the Bread Lab’s head technician, took me out to one of the experimental fields this summer, where the stalks stood in a patchwork of yellows and tans, all different heights and shapes. The researchers make the same basic test loaf from the freshly milled flour — whole wheat goes rancid quickly, so using fresh-milled is important — and then they taste it. They have identified one new wheat, which they’ve dubbed Skagit 1109, that makes a reliably tasty whole wheat bread. For the moment, a bakery making the Approachable Loaf will likely have to use commodity wheat, but ideally, they’ll develop better options.
The story of bread as we’ve known it is the story of our food system as a whole: In the 19th and 20th centuries, the advance of technology on farms, in mills, and in factories allowed the mass production of foods from an ever-longer list of ingredients, both natural and artificial. The Approachable Loaf symbolizes something else — the possibility that, through the application of science, even a food as humble and maligned as whole wheat bread can be both simpler and tastier.
Nutritionally, whole wheat flour is better for you than white. The germ and the bran, the portions of the wheat kernel with the most fiber and other nutrients, stay in whole wheat flour when it’s milled, giving it its distinctive dark color. But they usually curb your desire to put it in your mouth. Compared to the seductive quality of a good white sourdough — tangy and just a little stretchy — or even the gentle squish of a soft white grocery store loaf, melting seamlessly into a slab of grilled cheese, the ashy, faintly bitter whole wheat loaf is no competition.
The battle between light and dark in the matter of bread is longer and weirder than most people realize. While many might assume the rise of whole wheat bread as a health food started with the counterculture of the 1960s and ’70s, anthropologist Aaron Bobrow-Strain traces it back far earlier. Over thousands of years, the color of bread has carried various meanings, he writes in his book “White Bread: A Social History of the Store-Bought Loaf.” Hearty dark loaves were better for building a society than wimpy white ones, Plato argued in “The Republic”; Socrates, on the other hand, felt whole-meal bread was essentially animal food.
By the 19th century in the United States, activists claimed whole wheat would bring people closer to God, and thus to health. One influential obsessive was Sylvester Graham, the New England minister who gave his name to the graham cracker. A sickly child, he eventually turned to vegetarianism as an adult. Today, he might have started a blog about clean eating. Eating foods in their most natural form, like whole wheat, was what God intended man to do, Graham argued in lectures that caused riots in Boston and New York, and anything that was wrong with you could be taken care of with whole wheat bread and water.
Food is going high-tech — policy needs to catch up with it
BY THE BOSTON GLOBE EDITORIAL BOARD
or generations newspaper editorials have been the “eat your spinach” part of the operation. But what if that spinach can now be organic baby spinach, or hydroponically grown? What if we can eat it year round — and from just around the corner?
With a warming planet, the need for high-tech food and high-tech food policies is undeniable. Both are going to play an increasingly vital role in the planet’s future — and the way we eat. Here are a few ways to use science to steer food into a more sustainable path.
Learn to love GMOs, and resist efforts to demonize or prohibit them. Genetically modified food sets off alarm bells for purists, but crops designed to last longer or resist disease are increasingly necessary.
The good news is that new federal labeling regulations, which could become final by Dec. 1, will preclude the kind of state-by-state labeling regulations that Vermont had already indulged in and that Massachusetts has been perpetually on the cusp of enacting.
The even better news is that the science of food — of producing fruits with a longer shelf life, wheat that requires less water or fertilizer — is advancing so fast that even the foodie fearmongers can’t keep up.
First on the federal role: While moving at a glacial pace, the US Department of Agriculture has at long last brought forth a final set of regulations designed to implement a law passed by Congress in 2016 to deal with standards for disclosing bioengineered ingredients. Not surprisingly the new regs generated a huge amount of controversy — more than 14,000 comments received by the agency during the public comment period.
Assuming the regs are indeed finalized Dec. 1, they won’t go into effect until Jan. 1, 2020. What consumers are likely to notice is that GMO labeling will become “BE food,” or “bioengineered food.” And since at least two-thirds of all foods sold in the US contain some ingredients in that category — consumers are indeed likely to see it everywhere.
What it will accomplish is to prevent every state and locality from drafting its own labeling laws and, in the process, making the free movement of good products from state to state difficult if not impossible. And it will let innovation continue unhindered.
The future of seafood in the United States is aquaculture. Even the king of seafood, Roger Berkowitz, acknowledges that. “The technology has gotten so good with submersible pens,” said Berkowitz, chief executive of the Legal Sea Foods empire. “It’s a game changer.”
Berkowitz is particularly excited about the prospect of fish farms in federal open waters. Aquaculture in Massachusetts is largely confined to shallow waters; think oyster beds on Cape Cod. Of course, this country for years has talked about offshore fish farming, but the time has come, with wild fish stocks dwindling. In 2017, the US imported a record amount of seafood, more than 6 billion pounds, and exported only about 3.6 billion pounds.
While Massachusetts and some municipalities have regulated aquaculture, what’s needed now is a federal regulatory framework to support aquaculture in the ocean. It hasn’t been easy navigating the concerns of environmentalists, fishermen worried about their own livelihoods, and ships attached to particular routes. The ocean may be big, but surprisingly not big enough to accommodate everyone’s needs.
Congress can play a big role: Get a bill that everyone likes. Here’s another thought: How about supporting aquaculture as part of the farm bill, something US Representative Seth Moulton would like to see. With Democrats taking back the majority in the House, maybe this could get done next year.
Clear federal policies could enable the prospect of fish farming using the infrastructure of offshore wind turbines. Without such policies, the future of fish farming will remain murky, because these operations are expensive and investors don’t like uncertainty.
“No one would spend a dime on that,” said Peter Shelley, senior counsel at the Conservation Law Foundation, which has been closely following the development of aquaculture in the ocean. “It makes Cape Wind look like a sure bet.”
Assume change. Farm and food policies tend to deal with what we eat and grow now, but climate change should end that way of thinking. The government and industry need to anticipate disruption, and be ready to adapt, rather than pour money into trying to preserve vanishing industries that can’t be sustained any longer.
Rising temperature of oceans, for example, have forced the cod and lobsters to flee north to colder waters. We lament the loss of cod in Massachusetts, but Southern fish species are flocking to us now. In other words, we need to get used to “Cape Mahi-Mahi.”
Warmer temperatures in New England could extend the growing season for blueberries, strawberries, peaches, and corn. That could be a silver lining for consumers and farmers’ markets.
Food policy is often inherently conservative: organic food fans and proponents of farm subsidies want different versions of the same thing, which is to cling to the way food’s always been. But food is going to change whether we like it or not — and our food policies should try to direct those changes, not stop them.
Published at 5:39 PM EDT on Jun 19, 2018 | Updated at 7:10 AM EDT on Jun 20, 2018
The Florida citrus industry is having their worst harvest in 73 years, and scientists at the University of Connecticut are stepping in to help.
The poor harvest is in part because of damage from Hurricane Irma, but the devastation started long before that. A disease known as citrus greening has been wreaking havoc for years. UConn researchers are working on a solution.
“Our hope is that we can modify endogenous genes in citrus to create the greening disease’s resistance,” explained University of Connecticut scientist Dr. Yi Li.
Gene editing is often discussed in terms of medical advancements and new health treatments. But gene editing can also benefit the food we eat and agriculture as well. Some of the latest developments are happening in Connecticut.
Florida citrus crops have been falling victim to the greening disease since 2005. The contagious disease is spread by a bacteria found in insects feeding off of citrus crops. The bacteria grows and spreads throughout the trees. But the process is slow – it can take up to five years after a tree is infected for it to show signs of damage. As of today, 75 percent of the Florida citrus crops have been wiped out by this quickly spreading disease that has also made its way to crops in Texas and California.
The UConn scientists are working in conjunction with the University of Florida to find a cure.
“We are basically the technology development lab,” Li said. “And then once we develop the technology people in Florida our collaborators are going to use our technology to genetically modify citrus genome.”
These small, targeted changes to an organism’s original genes produce a specific beneficial result. These genetic alterations can provide plants and animals with beneficial characteristics, just like the disease resistance seen in the citrus crops.
Helping the Florida citrus crop is only part of what’s being done here in the lab. Li and his team have also been implementing their gene editing technique on landscaping products that could soon be used in your own backyard. Their latest project? Slow growing grass.
“We started to breed them to develop these traits that we thought would be beneficial to lawn owners, homeowners, and commercial lawn care people,” explains PhD student Lorenzo Katin-Grazzini, “Such as slow growth to drastically reduce the mowing time that’s needed to really just save cost and time and energy associated with turf grass management.”
Li has also created a genetically modified burning bush, a plant often found in New England that spreads rapidly. Where it grows nothing else can, decreasing the diversity in our forests.
“They either don’t produce seeds or produce very few seeds as such that the birds cannot spread them anymore because there are no seeds,” Li said. “So we hope that those plants are going to be released through horticulture in the next two to three years.”
But the lab at UConn isn’t stopping there.
“I do want to work with more ornamental plants,” Li said. “Particularly invasive plants because I do think that has a huge impact on biodiversity on our environment so if we can use gene editing technology to make that non-invasive that’s what I would like to work on.”
Published by the CT Mirror on May 28th, 2018
To feed the burgeoning human population, it is vital that the world figures out ways to boost food production.
Increasing crop yields through conventional plant breeding is inefficient – the outcomes are unpredictable and it can take years to decades to create a new strain. On the other hand, powerful genetically modified plant technologies can quickly yield new plant varieties, but their adoption has been controversial. Many consumers and countries have rejected GMO foods even though extensive studies have proved they are safe to consume.
But now a new genome editing technology known as CRISPR may offer a good alternative.
I’m a plant geneticist and one of my top priorities is developing tools to engineer woody plants such as citrus trees that can resist the greening disease, Huanglongbing (HLB), which has devastated these trees around the world. First detected in Florida in 2005, the disease has decimated the state’s $9 billion citrus crop, leading to a 75 percent decline in its orange production in 2017. Because citrus trees take five to 10 years before they produce fruits, our new technique – which has been nominated by many editors-in-chief as one of the groundbreaking approaches of 2017 that has the potential to change the world – may accelerate the development of non-GMO citrus trees that are HLB-resistant.
GENETICALLY MODIFIED VS. GENE EDITED
You may wonder why the plants we create with our new DNA editing technique are not considered GMO? It’s a good question.
Genetically modified refers to plants and animals that have been altered in a way that wouldn’t have arisen naturally through evolution. A very obvious example of this involves transferring a gene from one species to another to endow the organism with a new trait – like pest resistance or drought tolerance.
But in our work, we are not cutting and pasting genes from animals or bacteria into plants. We are using genome editing technologies to introduce new plant traits by directly rewriting the plants’ genetic code.
This is faster and more precise than conventional breeding, is less controversial than GMO techniques, and can shave years or even decades off the time it takes to develop new crop varieties for farmers.
There is also another incentive to opt for using gene editing to create designer crops. On March 28, 2018, U.S. Secretary of Agriculture Sonny Perdue announced that the USDA wouldn’t regulate new plant varieties developed with new technologies like genome editing that would yield plants indistinguishable from those developed through traditional breeding methods. By contrast, a plant that includes a gene or genes from another organism, such as bacteria, is considered a GMO. This is another reason why many researchers and companies prefer using CRISPR in agriculture whenever it is possible.
CHANGING THE PLANT BLUEPRINT
The gene editing tool we use is called CRISPR – which stands for “Clustered Regularly Interspaced Short Palindromic Repeats” – and was adapted from the defense systems of bacteria. These bacterial CRISPR systems have been modified so that scientists like myself can edit the DNA of plants, animals, human cells and microorganisms. This technology can be used in many ways, including to correct genetic errors in humans that cause diseases, to engineer animals bred for disease research, and to create novel genetic variations that can accelerate crop improvement.
To use CRISPR to introduce a useful trait into a crop plant, we need to know the genes that control a particular trait. For instance, previous studies have revealed that a natural plant hormone called gibberellin is essential for plant height. The GA20-ox gene controls the quantity of gibberellin produced in plants. To create a breed of “low mowing frequency” lawn grass, for example, we are editing the DNA – changing the sequence of the DNA that makes up gene – of this plant to reduce the output of the GA20-ox gene in the selected turf grass. With lower gibberellin, the grass won’t grow as high and won’t need to be mowed as often.
The CRISPR system was derived from bacteria. It is made up of two parts: Cas9, a little protein that snips DNA, and an RNA molecule that serves as the template for encoding the new trait in the plant’s DNA.
To use CRISPR in plants, the standard approach is to insert the CRISPR genes that encode the CRISPR-Cas9 “editing machines” into the plant cell’s DNA. When the CRISPR-Cas9 gene is active, it will locate and rewrite the relevant section of the plant genome, creating the new trait.
But this is a catch-22. Because to perform DNA editing with CRISPR/Cas9 you first have to genetically alter the plant with foreign CRISPR genes – this would make it a GMO.
A NEW STRATEGY FOR NON-GMO CROPS
For annual crop plants like corn, rice and tomato that complete their life cycles from germination to the production of seeds within one year, the CRISPR genes can be easily eliminated from the edited plants. That’s because some seeds these plants produce do not carry CRISPR genes, just the new traits.
But this problem is much trickier for perennial crop plants that require up to 10 years to reach the stage of flower and seed production. It would take too long to wait for seeds that were free of CRISPR genes.
My team at the University of Connecticut and my collaborators at Nanjing Agricultural University, Jiangsu Academy of Agricultural Sciences, University of Florida, Hunan Agricultural University and University of California-San Diego have recently developed a convenient, new technique to use CRISPR to reliably create desirable traits in crop plants without introducing any foreign bacterial genes.
We first engineered a naturally occurring soil microbe, Agrobacterium, with the CRIPSR genes. Then we take young leaf or shoot material from plants and mix them in petri dishes with the bacteria and allow them to incubate together for a couple of days. This gives the bacteria time to infect the cells and deliver the gene editing machinery, which then alters the plant’s genetic code.
In some Agrobacterium infected cells, the Agrobacterium basically serves as a Trojan horse, bringing all the editing tools into the cell, rather than engineering plants to have their own editing machinery. Because the bacterial genes or CRISPR genes do not become part of the plant’s genome in these cells – and just do the work of gene editing – any plants derived from these cells are not considered a GMO.
After a couple of days, we can cultivate plants from the edited plant cells. Then it take several weeks or months to grow an edited plant that could be planted on a farm. The hard part is figuring out which plants are successfully modified. But we have a solution to this problem too and have developed a method that takes only two weeks to identify the edited plants.
GENETICALLY DESIGNED LAWNS
One significant difference between editing plants versus human cells is that we are not as concerned about editing typos. In humans, such errors could cause disease, but off-target mutations in plants are not a serious concern. A number of published studies reported low to negligible off-target activity observed in plants when compared to animal systems.
Also, before distributing any plants to farmers for planting in their field, the edited plants will be carefully evaluated for obvious defects in growth and development or their responses to drought, extreme temperatures, disease and insect attacks. Further, DNA sequencing of edited plants once they have been developed can easily identify any significant undesirable off-target mutations.
In addition to citrus, our technology should be applicable in most perennial crop plants such as apple, sugarcane, grape, pear, banana, poplar, pine, eucalyptus and some annual crop plants such as strawberry, potato and sweet potato that are propagated without using seeds.
We also see a role for genome editing technologies in many other plants used in the agricultural, horticultural and forestry industries. For example, we are creating lawn grass varieties that require less fertilizer and water. I bet you would like that too.